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Microbes in Deep Sea Rocks Eat Global Warming Gas

<span style="font-size:11.0pt">Microscopic image of a group of multi-celled methane-oxidizing microbes found in deep-sea methane seeps in Hydrate Ridge, Oregon. (S. McGlynn, Caltech</span>)
1/12 Microscopic image of a group of multi-celled methane-oxidizing microbes found in deep-sea methane seeps in Hydrate Ridge, Oregon. (S. McGlynn, Caltech)
<span style="font-size:11.0pt">Microscopic image of methane-oxidizing microbes recovered from deep-sea methane seep sediments.&nbsp;&nbsp; Methane-oxidizing Archaea are stained with DNA probe in green, associated symbiotic bacteria are stained in blue.&nbsp; The orange-yellow materials are sediment particles.&nbsp; (S. McGlynn, Caltech</span>)
2/12 Microscopic image of methane-oxidizing microbes recovered from deep-sea methane seep sediments.   Methane-oxidizing Archaea are stained with DNA probe in green, associated symbiotic bacteria are stained in blue.  The orange-yellow materials are sediment particles.  (S. McGlynn, Caltech)
<span style="font-size:11.0pt">Using the manipulator arm of the submersible Alvin to collect carbonate and associated animals from an active methane seep off the coast of Costa Rica.&nbsp; (L. Levin, SIO</span>)
3/12 Using the manipulator arm of the submersible Alvin to collect carbonate and associated animals from an active methane seep off the coast of Costa Rica.  (L. Levin, SIO)
<span style="font-size:11.0pt">Manipulator arm of Alvin submersible collecting piece of carbonate from the ledge of the methane seep, Costa Rica Margin, 1,000 meters deep. (V. Orphan</span>)
4/12 Manipulator arm of Alvin submersible collecting piece of carbonate from the ledge of the methane seep, Costa Rica Margin, 1,000 meters deep. (V. Orphan)
<span style="font-size:11.0pt">Carbonate slab collected from Costa Rica Margin seep, with associated worms, snails and limpets.&nbsp; (G. Rouse</span>)
5/12 Carbonate slab collected from Costa Rica Margin seep, with associated worms, snails and limpets.  (G. Rouse)
<span style="font-size:11.0pt">A piece of deep-sea carbonate ledge in the manipulator claw with attached white sulfide oxidizing bacterial filaments and anemone, from the Eel River Basin, off the California coast, 550 meters deep. (V. Orphan</span>)
6/12 A piece of deep-sea carbonate ledge in the manipulator claw with attached white sulfide oxidizing bacterial filaments and anemone, from the Eel River Basin, off the California coast, 550 meters deep. (V. Orphan)
<span style="font-size:11.0pt">Submersible Alvin about to be launched from the back deck of the R/V Atlantis, Costa Rica Margin. (V. Orphan</span>)
7/12 Submersible Alvin about to be launched from the back deck of the R/V Atlantis, Costa Rica Margin. (V. Orphan)
<span style="font-size:11.0pt">View of R/V Atlantis ship from inside Alvin after a successful dive to the methane seeps off of Hydrate Ridge, Oregon.&nbsp; (V. Orphan</span>)
8/12 View of R/V Atlantis ship from inside Alvin after a successful dive to the methane seeps off of Hydrate Ridge, Oregon.  (V. Orphan)
<span style="font-size:11.0pt">Sponges colonizing carbonates from a dormant methane seep site, Eel River Basin, California. (V. Orphan</span>)
9/12 Sponges colonizing carbonates from a dormant methane seep site, Eel River Basin, California. (V. Orphan)
<span style="font-size:11.0pt">View from inside Alvin of carbonate pavement and boulders in an area of methane seepage from Hydrate Ridge, Oregon, 700 meters deep. (V. Orphan</span>)
10/12 View from inside Alvin of carbonate pavement and boulders in an area of methane seepage from Hydrate Ridge, Oregon, 700 meters deep. (V. Orphan)
<span style="font-size:11.0pt">Mussels nestled within exposed carbonate mound in an active methane seep. Costa Rica Margin, 1,000 meter water depth. (V. Orphan</span>)
11/12 Mussels nestled within exposed carbonate mound in an active methane seep. Costa Rica Margin, 1,000 meter water depth. (V. Orphan)
Aung San Suu Kyi, left, vice president Henry Van Thio and Myint Swe, right, attend the handover ceremony at the presidential palace in Naypyidaw.
12/12 Aung San Suu Kyi, left, vice president Henry Van Thio and Myint Swe, right, attend the handover ceremony at the presidential palace in Naypyidaw.
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A new study finds that tiny microbes inside rocks in the deep ocean are munching on methane.

Methane is a powerful greenhouse gas. Although it doesn’t remain in the atmosphere as long as carbon dioxide, while it's there, it is more than 80 times more potent than CO2. Methane is emitted by natural sources such as wetlands, as a byproduct of raising livestock, as well as from human activities, such as leakage from natural gas systems. It also is abundant in the ocean - largely in frozen reservoirs, but also seeping from deep within the earth's interior, through cracks in the ocean floor.

Little of that gas reaches the atmosphere, thanks to methane-eating microbes that live in seabed sediments near methane vents in the deep ocean.

Methane seeps from deep water vents

California Institute of Technology geo-biologist Victoria Orphan studies the habits of those microbes. She said they are adapted to survive in this extreme environment.

“These organisms would be able to extract energy from methane using sulfate found in sea water rather than oxygen and as an end product would produce hydrogen sulfide. So this is sort of that rotten egg smell. And also, as another by-product, these organisms would produce carbonate, sort of like the pavement you see on the sidewalk,” she said.

Over time, that calcium carbonate forms towering rocky seamounts adjacent to the methane seeps. Orphan hypothesized that those outcroppings also harbored life, so she hitched a ride on a submersible down 800 meters to the sea floor to prove it.

Rocks show signs of life

During four expeditions, between 2006 and 2011, samples of the sediment and the seamounts were retrieved from the near-freezing water. Orphan said the rock samples confirmed her theory.

“These are not just simply end products of methane oxidation, but they actually maintain a viable community of microorganisms living inside the pore spaces of the rock that turns out are still capable of consuming methane,” she said.

Her analysis showed that the seamount microbes did so at a slower rate than their methane-munching cousins in the sediment, however, because not as much methane seeps through the tiny fissures in the rock.

“But, considering that the volume of rock that is available to colonize down in these deep-sea environments, it still can be a significant potential source of methane consumption," said Orphan. "So instead of just considering this just a process that is going on in sediments, we have this whole other expansive habitat to look at as a sink for methane over time.”

Deep-sea microbes keep methane from escaping ocean

Writing in the journal Nature Communications, Orphan says the abundance of these tiny organisms - both in sediment and in rock - explains how the microbes can put a lid on methane in the world's oceans so it doesn’t make it through the water column to the atmosphere. And, she adds, the diversity of worms, crabs and other creatures crawling around the rocks consuming the microbes, may indicate a dynamic - previously unknown - ecosystem.

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